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Class, Architecture, Topology database

The SCOP database is curated manually, with the objective of placing proteins in the correct evolutionary framework based on conserved structural features. Two similar enterprises, the CATH (class, architecture, topology, and homologous superfamily) and FSSP (/old classification based on structure-structure alignment of proteins) databases, make use of more automated methods and can provide additional information. [Pg.144]

Templates can be selected using the target sequence as a query for searching protein structure databases [e.g. Brookhaven Protein Data Bank (PDB) http / /www.rcsb.org/pdb/index.html Structural Classification of Proteins (SCOP) scop.mrc-lmb.cam.ac.uk/scop/ DALI www2.ebi.ac.uk/dali/ Class, Architecture, Topology and Homologous superfamily classification at CATH www.biochem.ucl.a-c.uk/bsm/cath/). [Pg.75]

See other pages where Class, Architecture, Topology database is mentioned: [Pg.145]    [Pg.21]    [Pg.608]    [Pg.32]    [Pg.394]    [Pg.409]    [Pg.254]   
See also in sourсe #XX -- [ Pg.608 ]



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Class, Architecture, Topology

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