Catabolism aminoacids

As said above, plant root chemistry may also influence deeply alpine soil microorganism s biomass. It turns out that the particular chemical composition of exudates is a strong selective force in favour of bacteria that can catabolize particular compounds. Plants support heterotrophic microorganisms by way of rhizodeposition of root exudates and litter from dead tissue that include phenolic acids, flavonoids, terpenoids, carbohydrates, hydroxamic acids, aminoacids, denatured protein from dying root cells, CO2, and ethylene (Wardle, 1992). In certain plants, as much as 20-30% of fixed carbon may be lost as rhizodeposition (Lynch and Whipps, 1990). Most of these compounds enter the soil nutrient cycle by way of the soil microbiota, giving rise to competition between the myriad species living there, from microarthropods and nematodes to mycorrhiza and bacteria, for these resources (e.g. Hoover and Crossley, 1995). There is evidence that root phenolic exudates are metabolized preferentially by some soil microbes, while the same compounds are toxic to others. Phenolic acids usually occur in small concentration in soil chiefly because of soil metabolism while adsorption in clay and other soil particles plays a minor role (Bliun et al., 1999). However, their phytotoxicity is compounded by synergism between particular mixtures (Blum, 1996). 

Tryptophan is among the most interesting aminoacids because its biologic role goes far beyond its participation in proteins structure. In mammals, tryptophan is the precursor in the synthesis of the neurotransmitters tryp-tamine and serotonine, as well as of other bioactive molecules such as kynurenic and quinolinic acids. Along with the usual catabolic pathway of the aminoacid, other essential compounds are found, such as nicotinic acid and melatonin [1-3]. 

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