Side chains absolute configuration

Polymers of vinyl monomers having a chiral center may display optical activity, provided the stereogenic center in the side chains has predominantly a single absolute configuration. In these polymers each constitutional unit contains at least two stereogenic centers, one in the main chain and the other in the side chain. The configurational sequence distribution of the former defines the tacticity of the polymer, while the... 

Synthesis. In the syntheses of T and its congeners, formation of the stericaHy hindered diaryl ether core is difficult, as is the introduction of the alanyl side chain (or the preservation of its L (3) absolute configuration) and iodination to the desired degree (T or T. ... 

P212121 Z = 4 D = 2.01 R = 0.04 for 1,611 intensities. The compound is a minor product in the synthesis of methyl tyveloside. The pyranose conformation is a distorted 4, with Q = 66 pm 6= 162° (p=H8a. The (methylthio)carbonyl side-chain is extended. The C-S bond-lengths are 174.8, 179.1 pm. The C-I bond-length is 215.2 pm. The absolute configuration was confirmed by using the anomalous-scattering factors of the iodine atoms. 

Fig. 18. X-ray crystal structure of the injectable antiarthritic complex gold(I)-aurothiomalate 88 (side-chain on S omitted) showing the double helical chains. The right-handed helix shown contains thiomalate ligands with the R absolute configuration. Au-S bond lengths 2.283 and 2.286 A S-Au-S angles 178.88° and 169.41°. Adapted from (419).

These reactions, performed many times, show, in addition to the reversal of the absolute configuration of the product with the change in the configuration at C-8 and C-9 of the alkaloids, a small but reproducible difference in the e.e. of the product. It is evident that the diastereomeric nature of quinine vs. quinidine and cinchonidine vs. cinchonine expresses itself via small but important energy differences in the best fits of the transition states. Noteworthy in this respect is the fine work of Kobayashi (20), who observed larger differences (in the e.e. s of products) when the diastereomeric cinchona alkaloids were used as catalysts after having been copolymerized with acrylonitrile (presumably via the vinyl side chain of the alkaloids). 

Some generic structures of /3-amino acids are shown in Fig. 6.40. Since, in /3-amino acids, two C-atoms separate the amino and carboxylate groups, there are two possible locations for attachment of a single side chain (i.e., /32 and /33), or even two or more side chains (e.g., /32,3 and /32,2,3, respectively). In a /3-peptide, these symbols can be used as prefixes, e.g., the /33/32-dipeptide in Fig. 6.40 becomes /33-HAla- /32-HVal for R=Me and R = i-Pr. The stereodescriptors (R) and (S) should be used to specify the absolute configuration at the stereogenic centers. The same rules apply to y-amino acids and y-peptides. 

In 1993, Oki et al. isolated the novel carbazole antibiotics epocarbazolin A (258) and B (259) from the culture broth of Streptomyces anulatus T688-8 (230). They represent the first carbazole alkaloids with an epoxide moiety in a side chain, and are the epoxides corresponding to carbazomadurin A (256) and B (257). Epocarbazolin A (258) [oC + 75.0 (c 0.5, MeOH) and B (259) Mg -b 78.0 (c 0.5, MeOH) were obtained from Nature in optically active form. However, their absolute configuration is not known. These alkaloids showed potent 5-lipoxygenase inhibitory activity and weak antibacterial activity (230) (Scheme 2.63). 

Crist, B.V. Li, X. Bergquist, P.R. Djerassi, C. (1983) Isolation, partial synthesis, and determination of absolute configuration of pulchrasterol. The first example of double bioalkylation of the sterol side chain at position 26. J. Org. Chem., 48,4472-9. 

The two-carbon side chain is essential for activity, although some exceptions are known. The benzylic carbon (next to the ring) must have the R absolute configuration. 

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