Quinones hydrogen bonding

The keto-enol tautomerism of the dihydroxy perylenequinones 33a-d was studied by H, and "C NMR spectroscopy " (equation 13). The most important factors determining the tautomeric equilibrium in these helix-shaped systems are the substituent effects, the strength of intramolecular phenol-quinone hydrogen bonds, the distortion from planarity of the perylenequinone structure and solvation as well as aggregation effects. 

There is a fair amount of work reported with films at the mercury-air interface. Rice and co-workers [107] used grazing incidence x-ray diffraction to determine that a crystalline stearic acid monolayer induces order in the Hg substrate. Quinone derivatives spread at the mercury-n-hexane interface form crystalline structures governed primarily by hydrogen bonding interactions [108]. 

A 6 positional state that is stabilized by the interaction of His 161 with a molecule of the inhibitor stigmatellin bound in the quinone binding pocket (41), which is supposed to mimic the hydrogen bonding pattern of the reaction intermediate, semiqui-none (43)... 

Fig. 14. Plot of the g values g,g ) and of the average g value g vs rhombicity (UJ of (a) wild type (open symbol) and variant forms (closed symbols) of the Rieske protein in yeast bci complex where the residues Ser 183 and Tyr 185 forming hydrogen bonds into the cluster have been replaced by site-directed mutagenesis [Denke et al. (35) Merbitz-Zahradnik, T. Link, T. A., manuscript in preparation] and of (b) the Rieske cluster in membranes of Rhodobacter capsulatus in different redox states of the quinone pool and with inhibitors added [data from Ding et al. (79)]. The solid lines represent linear fits to the data points the dashed lines reproduce the fits to the g values of all Rieske and Rieske-type proteins shown in Fig. 13.

In the ci positional state, fast electron transfer from the Rieske protein to cytochrome Ci will he facilitated hy the close interaction and by the hydrogen bond between His 161 of the Rieske protein and a propionate group of heme Ci, but the Rieske cluster is far away from the quinone binding site. 

Because of the exposed histidine ligands of the [2Fe-2S] cluster, the Rieske is capable of binding quinones in a redox-dependent manner. The variation of the hydrogen bond strength and of the electrostatic properties will control the movement of the catalytic domain of the Rieske protein. Therefore, the function depends on the unique structural and electrochemical properties of the Rieske cluster. 

SCHEME 7.20 Cyclopent[6]indole analogues. Quinone methide structure shown with internal hydrogen bonding. 

The results of AE calculations shown in Scheme 7.26 show that internal hydrogen bonds can influence the thermodynamics of quinone methide tautomerization in some instances. For the prekinamycin quinone methide without internal hydrogen bonds... 

Lemus, R. H. Skibo, E. B. Design of pyritnido[4.5-s quinazoline-based anthraquinone mimics, structure-activity relationship for quinone methide formation and the influence of internal hydrogen bonds on quinone methide fate. J. Org. Chem. 1992, 57, 5649-5660. 

Some quinones, having the ability to form intra- and/or intermolecular hydrogen bonds, exhibit high molecular hyperpolarizability and are third-order nonlinear optical (NLO) materials. Compound 39 has a %(3) of 5 x 10 11 esu at 1.9 pm, and is a third-order NLO material.23 The optoelectric properties of quinoid compounds correlate with their structures in crystals or on thin films.23... 

S. Sinnecker, E. Reijerse, F. Neese and W. Lubitz, Hydrogen bond geometries from paramagnetic resonance and electron-nuclear double resonance parameters Density functional study of quinone radical anion-solvent interactions, J. Am. Chem. Soc., 2004, 126, 3280. 

A linear hydrogen-bonded structure VIII has also been proposed, but accounts less satisfactorily for the color. The surprising thing about these complexes is the lack of any measurable exchange of the hydroxyl hydrogen atoms from the hydroquinone moiety to the quinone moiety... 

The solid-solid transformation of 2-amino-3-hydroxy-6-phenylazopyridine, 57a, to 57b proceeds through two intermediate phases (119). X-Ray and IR studies of the former, low-temperature, and the latter, high-temperature phase show that they are the phenolazo and quinone hydrazone forms, respectively. This solid-state tautomerism can be accounted for by a cooperative intermolecular shift of protons across the various hydrogen bonds. However, because of the complexity of the hydrogen-bond network, the actual pathway of the proton shift has not been uniquely defined. 

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