Purines reduction

There has been continued interest in the radiation chemistry of the purines since early reports on oriented DNA by Graslund et al. [35] which suggest that the main trapping site of one-electron oxidation in DNA is the guanine base. It is remarkable that in aqueous solution, the electron adducts of the purine nucleosides and nucleotides undergo irreversible protonation at carbon with a rate constant 2 orders of magnitude higher than that for carbon protonation of the electron adduct in thymidine [36]. It is therefore important to know the properties of the various purine reduction products and to ask why they have not been observed in irradiated DNA. 

The mechanism of reduction is postulated to involve a 2e reduction of the 1,6 double bond, and immediate 2e reduction of the product, to give 1,2,3,6-tetrahydroadenine. This, in turn, undergoes reductive deamination to form 2,3-dihydropurine, which is further reduced to 1,2,3,6-tetrahydropurine, followed by cleavage of the 2,3 bond with formation of the same diazotizable amine as in purine reduction 153-i6. 162> One reported observation in apparent conflict with this scheme is the detection of purine as an intermediate 1631. On cyclic voltammetry at the H.M.D.F., adenine exhibits a single pH-dependent cathodic peak, with no anodic peak on the return scan 36). 

Purines, N-alkyl-N-phenyl-synthesis, 5, 576 Purines, alkylthio-hydrolysis, 5, 560 Mannich reaction, 5, 536 Michael addition reactions, 5, 536 Purines, S-alkylthio-hydrolysis, 5, 560 Purines, amino-alkylation, 5, 530, 551 IR spectra, 5, 518 reactions, 5, 551-553 with diazonium ions, 5, 538 reduction, 5, 541 UV spectra, 5, 517 Purines, N-amino-synthesis, 5, 595 Purines, aminohydroxy-hydrogenation, 5, 555 reactions, 5, 555 Purines, aminooxo-reactions, 5, 557 thiation, 5, 557 Purines, bromo-synthesis, 5, 557 Purines, chloro-synthesis, 5, 573 Purines, cyano-reactions, 5, 550 Purines, dialkoxy-rearrangement, 5, 558 Purines, diazoreactions, 5, 96 Purines, dioxo-alkylation, 5, 532 Purines, N-glycosyl-, 5, 536 Purines, halo-N-alkylation, 5, 529 hydrogenolysis, 5, 562 reactions, 5, 561-562, 564 with alkoxides, 5, 563 synthesis, 5, 556 Purines, hydrazino-reactions, 5, 553 Purines, hydroxyamino-reactions, 5, 556 Purines, 8-lithiotrimethylsilyl-nucleosides alkylation, 5, 537 Purines, N-methyl-magnetic circular dichroism, 5, 523 Purines, methylthio-bromination, 5, 559 Purines, nitro-reactions, 5, 550, 551 Purines, oxo-alkylation, 5, 532 amination, 5, 557 dipole moments, 5, 522 H NMR, 5, 512 pJfa, 5, 524 reactions, 5, 556-557 with diazonium ions, 5, 538 reduction, 5, 541 thiation, 5, 557 Purines, oxohydro-IR spectra, 5, 518 Purines, selenoxo-synthesis, 5, 597 Purines, thio-acylation, 5, 559 alkylation, 5, 559 Purines, thioxo-acetylation, 5, 559... 

The 3-amino group of 3,4-diamino-2//-pyrido[l,2-u]pyrimidin-2-ones 216, obtained from 3-nitroso derivatives by reduction with Na2S204 in 30% NH4OH at 70-80 °C, was acylated with acyl chlorides, and the acylated products 217 were cyclized to pyrido[2,l-Z)]purin-10-ones 218 by treatment with NaOMe (95JHC1725). 

Figure 34-6. Regulation of the reduction of purine and pyrimidine ribonucleotides to their respective 2 -deoxyribonucleotides. Solid lines represent chemical flow. Broken lines show negative ( ) or positive ( ) feedback regulation.

Under low oxygen conditions, C5 -sugar radicals can react with the base residue on the same nucleotide. In purine nucleotides, the carbon-centered radical 91 can add to the C8-position of the nucleobase (Scheme 8.31). Oxidation of the intermediate nucleobase radical 92 yields the 8,5 -cyclo-2 -deoxypurine lesion 93197,224,225,230-233 Similarly, in pyrimidine nucleotides, the C5 -radical can add to the C6-position of nucleobase. Reduction of the resulting radical intermediate yields the 5, 6-cyclo-5,6-dihydro-2 -deoxypyrimidine lesion 94,234-236... 

The bulk effect of water as a solvent is rather dramatic since it causes a drastic reduction of the nucleophilicity of 9-methyladenine N1 and even more of 9-methylguanine 06. As a result, there is a reversal of the nucleophilicity order of the purine bases passing from gas phase to aqueous solution. In fact, in solution, methyladenine is more nucleophilic than methylguanine. Moreover, oxygen and N7 nucleophilic centers of 9-methylguanine compete almost on the same footing in solution (Table 2.2) and also the reactivity gap between N1 and N7 of 9-methyladenine is highly reduced in comparison to the gas phase. 

Lemus, R. L. Lee, C. H. Skibo, E. B. Studies of extended quinone methides. Synthesis and physical studies of purine-like monofunctional and bifunctional imidazo[4,5-g]quinazo-line reductive alkylating agents. J. Org. Chem. 1989, 54, 3611-3618. 

Folic acid antagonist inhibits dihydrofolate reductase (DHFR) blocks reduction of folate to tetrahydrofolate inhibits de novo purine synthesis results in arrest of DNA, RNA, and protein synthesis... 

The dihydrofolate reductase enzyme (DHFR) is involved in one-carbon metabolism and is required for the survival of prokaryotic and eukaryotic cells. The enzyme catalyzes the reduction of dihydrofolate to tetrahydrofolate, which is required for the biosynthesis of serine, methionine, purines, and thymidylate. The mouse dihydrofolate reductase (mDHFR) is a small (21 kD), monomeric enzyme that is highly homologous to the E. coli enzyme (29% identify) (Pelletier et al., 1998). The three-dimensional structure of DHFR indicates that it is comprised of three structural fragments F[l], F[2] andF[3] (Gegg etal., 1997). 

One-electron oxidation of the adenine moiety of DNA and 2 -deoxyadenos-ine (dAdo) (45) gives rise to related purine radical cations 46 that may undergo either hydration to generate 8-hydroxy-7,8-dihydroadenyl radicals (47) or deprotonation to give rise to the 6-aminyl radicals 50. The formation of 8-oxo-7,8-dihydro-2 -deoxyadenosine (8-oxodAdo) (48) and 4,6-diamino-5-formamidopyrimidine (FapyAde) (49) is likely explained in terms of oxidation and reduction of 8-hydroxy-7,8-dihydroadenyl precursor radicals 47, respectively [90]. Another modified nucleoside that was found to be generated upon type I mediated one-electron oxidation of 45 by photoexcited riboflavin and menadione is 2 -deoxyinosine (51) [29]. The latter nucleoside is likely to arise from deamination of 6-aminyl radicals (50). Overall, the yield of formation of 8-oxodAdo 48 and FapyAde 49 upon one-electron oxidation of DNA is about 10-fold-lower than that of 8-oxodGuo 44 and FapyGua 43, similar to OH radical mediated reactions [91]. 

Base stacking will further modulate the reduction potentials. Initial calculations show that pyrimidines flanked by other pyrimidines, like in 3 -TTT-5 or 3 -TCT-5 sequences, are most easily reduced. Incorporation of a purine base close to the pyrimidine, however, seems to make the pyrimidine reduction more difficult [40]. 

Jl. Jaffe, E. R., The reduction of methemoglobin in human erythrocytes incubated with purine nucleosides. J. Clin. Invest. 38, 1555-1563 (1959). 

Point mutations can occur when one base is substituted for another (base substitution). Substitution of another purine for a purine base or of another pyrimidine for pyrimidine is called a transition, while substitutions of purine for pyrimidine or pyrimidine for purine are called transversions. Both types of base substitution have been identified within mutated genes. These changes lead to a codon change which can cause the wrong amino acid to be inserted into the relevant polypeptide and are known as mis-sense mutations. Such polypeptides may have dramatically altered properties if the new amino acid is close to the active center of an enzyme or affects the three-dimensional makeup of an enzyme or a structural protein. These changes, in turn, can lead to change or reduction in function, which can be detected as a change in phenotype of the affected cells. 

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