Pfam server

Another resource derived from BLOCKS and PRINTS is IDENTIFY, which, instead of encoding the exact information at each position in an alignment, tolerates alternative residues according to a set of prescribed groupings of related biochemical properties. IDENTIFY and its search software, eMOTIF (Huang and Brutlag, 2001), are accessible for use from the protein function Web server of the Biochemistry Department at Stanford University, http //dna.Stanford.edu/identify/. PANAL (http //mgd.ahc.umn.edu/panal/run panal.html) of Computational Biology Centers at the University of Minnesota is a combined resource for ProSite, BLOCKS, PRINTS, and Pfam (Bateman et al., 2000). 

Chukkapalli, G., C. Guda, and S. Subramaniam. 2004. SledgeHMMER A web server for batch searching the Pfam database. Nucleic Acids Res 32 W542 1. 

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