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Monte Carlo equilibrium simulations of ligand-protein thermodynamics

Monte Carlo equilibrium simulations of ligand-protein thermodynamics [Pg.306]

Monte-Carlo simulations allow to d5mamically optimize the step sizes at each temperature by taking into account the inhomogeneity of the molecular [Pg.307]

Simulations are arranged in cycles, and after a given cycle i, where the average acceptance ratio for each degree of freedom j is PjY, the step sizes (7) for each degree of freedom are updated for cycle i -I- 1 according to the formula [Pg.308]

IV.2. Monte Carlo equilibrium simulations of ligand-protein thermodynamics... [Pg.306]

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Carlo simulation

Equilibrium thermodynamics

Ligand-protein Thermodynamics

Ligands equilibria

Monte Carlo simulation

Monte Carlo simulation proteins

Monte simulations

Protein ligand equilibria

Protein-ligand

Proteins thermodynamics

Simulations proteins

Thermodynamics Equilibrium/equilibria

Thermodynamics of equilibria

Thermodynamics of proteins