Molecular potential saddle point

An IRC calculation examines the reaction path leading down from a transition structure on a potential energy surface. Such a calculation starts at the saddle point and follows the path in both directions from the transition state, optimizing the geometry of the molecular system at each point along the path. In this way, an IRC calculation definitively connects two minima on the potential energy surface by a path which passes through the transition state between them. 

Figure 14. (a) Potential-energy surfaces, with a trajectory showing the coherent vibrational motion as the diatom separates from the I atom. Two snapshots of the wavepacket motion (quantum molecular dynamics calculations) are shown for the same reaction at / = 0 and t = 600 fs. (b) Femtosecond dynamics of barrier reactions, IHgl system. Experimental observations of the vibrational (femtosecond) and rotational (picosecond) motions for the barrier (saddle-point transition state) descent, [IHgl] - Hgl(vib, rot) + I, are shown. The vibrational coherence in the reaction trajectories (oscillations) is observed in both polarizations of FTS. The rotational orientation can be seen in the decay of FTS spectra (parallel) and buildup of FTS (perpendicular) as the Hgl rotates during bond breakage (bottom). 

The optimization of minima and saddle points of a function in many variables is reviewed. Emphasis is on methods applicable to the calculation of electronic wave functions (ground and excited states) and the optimization of minima and transition states of molecular potential energy surfaces. 

Fig. 5.41 The distribution of the electron density (charge density) p for a homonuclear diatomic molecule X2. One nucleus lies at the origin, the other along the positive z-axis (the z-axis is commonly used as the molecular axis). The xz plane represents a slice through the molecule along the z-axis. The —p = f(x, z) surface is analogous to a potential energy surface E = /(nuclear coordinates), and has minima at the nuclei (maximum value of p) and a saddle point, corresponding to a bond critical point, along the z axis (midway between the two nuclei since the molecule is homonuclear)...

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