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Molecular dynamics sequence homology

First of all, the use of molecular mechanics and dynamics pre-suppose a three-dimensional structure or a model built by sequence homology. Even if molecular mechanics involves large simplifications, it is an extremely powerful and reliable technique to study organic systems, except for reaction pathways. Molecular dynamics is a simple technique which is almost insensitive to temperature but extremely sensitive to the chosen time-step for the integration of the Newton s law. If the main interest of the user is to explore the conformational space of a system, then heating is the best choice (up to 1000 K or more). [Pg.149]

See other pages where Molecular dynamics sequence homology is mentioned: [Pg.557]    [Pg.281]    [Pg.313]    [Pg.405]    [Pg.299]    [Pg.166]    [Pg.64]    [Pg.131]    [Pg.593]    [Pg.33]    [Pg.441]    [Pg.138]    [Pg.167]    [Pg.411]    [Pg.360]    [Pg.817]    [Pg.174]    [Pg.108]    [Pg.8]    [Pg.201]    [Pg.203]    [Pg.253]    [Pg.118]    [Pg.10]    [Pg.125]    [Pg.153]    [Pg.830]    [Pg.199]    [Pg.541]    [Pg.395]    [Pg.351]    [Pg.454]    [Pg.367]    [Pg.106]    [Pg.326]    [Pg.580]    [Pg.2175]    [Pg.2251]    [Pg.2252]    [Pg.113]    [Pg.35]    [Pg.345]    [Pg.157]    [Pg.18]    [Pg.177]    [Pg.79]    [Pg.768]    [Pg.49]    [Pg.880]   
See also in sourсe #XX -- [ Pg.149 ]



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Molecular sequence

Molecular sequencing

Sequence homology

Sequencing homology

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