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Merck Modeling Force Field

Cheng A, Best SA, Merz KM Jr., Reynolds CH. GB/SA water model for the Merck molecular force field (MMFF). J Mol Graphics Modell 2000 18 273-282. [Pg.27]

Molecular mechanics models differ both in the number and specific nature of the terms which they incorporate, as well as in the details of their parameterization. Taken together, functional form and parameterization, constitute what is termed a force field. Very simple force fields such as SYBYL, developed by Tripos, Inc., may easily be extended to diverse systems but would not be expected to yield quantitatively accurate results. On the other hand, a more complex force field such as MMFF94 (or more simply MMFF), developed at Merck Pharmaceuticals, while limited in scope to common organic systems and biopolymers, is better able to provide quantitative accounts of molecular geometry and conformation. Both SYBYL and MMFF are incorporated into Spartan. [Pg.58]

Many different force fields are now available from commercial and other sources. Some force fields like the MM series of force fields developed by Allinger and the Merck MM [10] have been parameterized primarily for molecular mechanics and dynamics of small molecules. Due to their limited importance for polymer simulations, they will not be covered in this section however, they have been used to study conformational properties of model compounds for some aromatic polymers. In some cases, force fields primarily developed for biomolecules such as AMBER, CHARMM, and GROMOS have been used in the molecular simulation of polymeric systems. Force fields having particular importance for polymers include simple but versatile... [Pg.61]


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