Macrocycles three-dimensional

Kaiser A, Bduerle P (2005) Macrocycles and Gomplex Three-Dimensional Structures Comprising Pt(II) Building Blocks. 249 in press Kaler EW.see Hentze H-P (2003) 226 197-223... 

The coordinated macrocycle readily reacts with alkoxide ions to yield products of type (71) (Taylor, Urbach Busch, 1969). In so doing additional flexibility is imparted to the ring which may reduce ring strain and, in part, provide a driving force for the reaction. Thus the coordinated imine carbons appear predisposed to attack by such nucleophiles. Based on this knowledge, elegant template syntheses of three-dimensional derivatives have been performed. The syntheses involved the reaction of [M(taab)]2+ (M = Ni, Cu) with the dialkoxide ions derived from bis(2-hydroxyethyl)sulphide or bis(2-hydroxyethyl)methylamine (Katovic, Taylor Busch, 1969). The products were demonstrated to be monomeric square-pyramidal complexes of type (72). The condensation... 

Reactions of selected metal complexes of multidentate amines with formaldehyde and a range of carbon acids (such as nitroethane) have led to ring-closure reactions to yield a series of three-dimensional cage molecules (see Chapter 3). Condensations of this type may also be used to produce two-dimensional macrocycles (Comba et al., 1986) - see [2.20], In such cases, it appears that imine intermediates are initially produced by condensation of the amines with formaldehyde as in the Curtis reaction. This is followed by attack of the conjugate base of the carbon acid on an imine carbon. The resulting bound (new) carbon acid then reacts with a second imine in a cis site to yield chelate ring formation. 

The use of porphyrinic ligands in polymeric systems allows their unique physio-chemical features to be integrated into two (2D)- or three-dimensional (3D) structures. As such, porphyrin or pc macrocycles have been extensively used to prepare polymers, usually via a radical polymerization reaction (85,86) and more recently via iterative Diels-Alder reactions (87-89). The resulting polymers have interesting materials and biological applications. For example, certain pc-based polymers have higher intrinsic conductivities and better catalytic activity than their parent monomers (90-92). The first example of a /jz-based polymer was reported in 1999 by Montalban et al. (36). These polymers were prepared by a ROMP of a norbor-nadiene substituted pz (Scheme 7, 34). This pz was the first example of polymerization of a porphyrinic macrocycle by a ROMP reaction, and it represents a new general route for the synthesis of polymeric porphyrinic-type macrocycles. 

These complex macrobicycles were assembled by the incorporation of eight more building blocks, forming 12-24 new bonds in a one-pot reaction. The more complex three-dimensional multi-macrocyclic pseudopeptides like the igloos might in principle be considered mimics of internally disulfide bridged crumpled proteins like the knottins (Scheme 27) [101]. 

Macrocycles and Complex Three-Dimensional Structures Comprising Pt(II) Building Blocks A. Kaiser P. Bauerle... 

Both of the tetraaza[3.3.3.3]paracyclophane (1) and tetraaza[n.l.n.l]paracyclo-phane (n = 6, 7, 8 cf. 2) rings have frequently been used as fundamental molecular skeletons for preparation of functionalized macrocyclic hosts [24-36]. Formation of three-dimensionally extended hydrophobic cavities was approached by introducing multiple hydrocarbon branches into the macrocyclic skeletons. Multiple hydrophobic chains thus placed in a macrocycle must be extended in the same direction and undergo mutual association to attain their optimal hydrophobic interactions in aqueous media due to thermodynamic reasons, while in nonaqueous media they presumably assume a free and separated configuration to minimize their mutual steric interactions. Consequently, such hydrophobic branches may provide a large hydrophobic cavity in aqueous media. 

In order to construct a hydrophobic three-dimensional cavity that is in-tramolecularly limited in space, we have prepared cage-type cyclophanes by linking macrocyclic rings. First we prepared a macropolycyclic host, which is constructed with two rigid macrocyclic skeletons of different size, tetraaza[3.3.3.3]paracyclophane as the larger one and tetraazacyclotetradecane as the smaller one, and four flexible hydrocarbon chains that connect the two macrocycles [40]. The flexibility of four hydrocarbon chains connecting the two macrocycles allows the induced-fit host-guest interaction in aqueous media. 

Whereas macrocycles define a two-dimensional, circular hole, macrobicycles define a three-dimensional, spheroidal cavity, particularly well suited for binding the spherical alkali cations (AC) and alkaline-earth cations (AEC). 

The energetics of isomer prediction using molecular mechanics is discussed in detail in Chapter 7. One of the results of such a study is the structure of each of the isomers.The archetypal studies in this field relate to the complexes [Co(dien)2]3+ (dien = 3-azapentane-l,5-diamine see Chapter 7). Other important studies include those on macrocyclic ligands (see also Chapter 8). Tetraaza macrocyclic ligands, for example, can adopt a series of configurational isomers, and these have been the subject of numerous molecular mechanics calculations. Consider an equatorially coordinated tetraaza macrocylce. Each of the amine groups can coordinate with the amine proton or substituent disposed above or below the coordination plane. How many isomers result depends on the symmetry of the macrocycle. For example, in the classic case of cyclam (cyclam - 14-ane-N4 = 1,4,8,11-tetraazacyclotetradecane) there are five isomers[12] and these are shown schematically in Fig. 6.3. It is not always possible to prepare or separate all of these isomers and, therefore, in many cases only a minority have been structurally characterized. Thus, the energy-minimized structures represent the best available three-dimensional representations of the other isomers. 

The reactions that we considered in Section 6.8 all gave planar macrocyclic systems. It is also possible to introduce a little more three dimensional structure into the macrocyclic ligands by the use of suitable structured diamines in these reactions. For example, the reaction of 6.59 with formaldehyde and ammonia in the presence of nickel(n) salts gives the complex 6.60. Notice that the overall stoichiometry of the reaction involves one equi-... 

In this chapter we have covered a great deal of material relating to the preparation of macrocyclic complexes. The basic reactions that we have introduced in earlier chapters have now found a synthetic use. At the very end of the chapter we began to ponder ways of introducing three dimensional structure into macrocyclic systems. This is the topic that we consider in the next chapter. 

What should we do to observe a three-dimensional template effect First, we should choose a reaction type that we know to be effective for the formation of macrocyclic ligands and extend the methodology to a kinetically inert cP or d6 metal centre. Let us reconsider the reaction, that we first encountered in Fig. 6-11. In this reaction, a dioximato complex reacted with BF3 to give the nickel(n) complex of a dianionic macrocycle (Fig. 7-1). 

---