Lennard-Jones models structural glasses

Recently, many experiments have been performed on the structure and dynamics of liquids in porous glasses [175-190]. These studies are difficult to interpret because of the inhomogeneity of the sample. Simulations of water in a cylindrical cavity inside a block of hydrophilic Vycor glass have recently been performed [24,191,192] to facilitate the analysis of experimental results. Water molecules interact with Vycor atoms, using an empirical potential model which consists of (12-6) Lennard-Jones and Coulomb interactions. All atoms in the Vycor block are immobile. For details see Ref. 191. We have simulated samples at room temperature, which are filled with water to between 19 and 96 percent of the maximum possible amount. Because of the hydrophilicity of the glass, water molecules cover the surface already in nearly empty pores no molecules are found in the pore center in this case, although the density distribution is rather wide. When the amount of water increases, the center of the pore fills. Only in the case of 96 percent filling, a continuous aqueous phase without a cavity in the center of the pore is observed. 

As we discussed in the section on the structural properties of amorphous polymers, the relative size of the bond length and the Lennard-Jones scale is very different when comparing coarse-grained models with real polymers or chemically realistic models, which leads to observable differences in the packing. Furthermore, the dynamics in real polymer melts is, to a large extent, determined by the presence of dihedral angle barriers that inhibit free rotation. We will examine the consequences of these differences for the glass transition in the next section. 

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