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Knowledge-based protein modeling

MS Johnson, N Srimvasan, R Sowdhamini, TL Blundell. Knowledge-based protein modelling. CRC Crit Rev Biochem Mol Biol 29 1-68, 1994. [Pg.301]

Swiss-Model (An Automated Knowledge-Based Protein Modelling Server)... [Pg.372]

Johnson, M.S., Srinivasan, N., Sowdhamini, R., and Blundell, T.L. (1994) Knowledge-based protein modeling, Crit. Rev. Biochem. Mol. Biol. 29, 1-68. [Pg.373]

This review will present an overview of current molecular mechanics techniques and discuss some of their limitations. We will then look at knowledge-based protein prediction strategies and examine the incorporation of such empirical rules into refinement methodologies for model protein systems. More comprehensive reviews of molecular dynamics simulations, knowledge-based protein modeling, and protein folding simulations are available. - " ... [Pg.58]

J Bajorath, R Stenkamp, A Amffo. Knowledge-based model building of proteins Concepts and examples. Protein Sci 2 1798-1810, 1994. [Pg.302]

MJ Sutcliffe, I Haneef, D Carney, TL Blundell. Knowledge based modelling of homologous proteins. Part I Three dimensional frameworks derived from the simultaneous superposition of multiple structures. Protein Eng 1 377-384, 1987. [Pg.304]

MJ Sutcliffe, ERE Hayes, TL Blundell. Knowledge based modeling of homologous proteins. Part II Rules for the conformation of substituted side-chains. Protein Eng 1 385-392, 1987. [Pg.304]

ProSa uses two kinds of knowledge-based potentials, one to model pairwise interactions between protein atoms, and one for protein-solvent interactions. [Pg.157]

C. Vinals, X. De Bolle, E. Depiereux, and E. Feytmans, Knowledge-based modeling of the D-lactate dehydrogenase three-dimensional structure, Proteins 1995, 21, 307-318. [Pg.486]

See other pages where Knowledge-based protein modeling is mentioned: [Pg.304]    [Pg.394]    [Pg.141]    [Pg.373]    [Pg.456]    [Pg.458]    [Pg.158]    [Pg.58]    [Pg.118]    [Pg.1035]    [Pg.304]    [Pg.394]    [Pg.141]    [Pg.373]    [Pg.456]    [Pg.458]    [Pg.158]    [Pg.58]    [Pg.118]    [Pg.1035]    [Pg.283]    [Pg.353]    [Pg.1032]    [Pg.1039]    [Pg.204]    [Pg.214]    [Pg.313]    [Pg.778]    [Pg.778]    [Pg.36]    [Pg.402]    [Pg.402]    [Pg.344]    [Pg.345]    [Pg.69]    [Pg.293]    [Pg.154]    [Pg.155]    [Pg.162]    [Pg.238]    [Pg.556]    [Pg.252]    [Pg.5]    [Pg.283]    [Pg.24]    [Pg.30]    [Pg.33]    [Pg.90]    [Pg.412]    [Pg.309]    [Pg.173]   
See also in sourсe #XX -- [ Pg.58 ]



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Knowledge bases

Knowledge, modeling

Knowledge-based

Knowledge-based modeling

Knowledge-based prediction protein modeling

Model protein

Protein-based

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