Interaction region

An important further consequence of curvature of the interaction region and a late barrier is tliat molecules that fail to dissociate can return to the gas-phase in vibrational states different from the initial, as has been observed experunentally in the H2/CU system [53, ]. To undergo vibrational (de-)excitation, the molecules must round the elbow part way, but fail to go over the barrier, eitlier because it is too high, or because the combination of vibrational and translational motions is such that the molecule moves across rather than over the barrier. Such vibrational excitation and de-excitation constrains the PES in that we require the elbow to have high curvature. Dissociation is not necessary, however, for as we have pointed out, vibrational excitation is observed in the scattering of NO from Ag(l 11) [55]. 

The wavepacket is propagated until a time where it is all scattered and is away from the interaction region. This time is short (typically 10-100 fs) for a direct reaction. Flowever, for some types of systems, e.g. for reactions with wells, the system can be trapped in resonances which are quasi-bound states (see section B3.4.7). There are eflScient ways to handle time-dependent scattering even with resonances, by propagating for a short time and then extracting the resonances and adding their contribution [69]. 

The sti ong and weak interaction regions of the internal configuration space is divided into a certain number of spherical hypeiradial shells. The 2D diabatic... 

After an alignment of a set of molecules known to bind to the same receptor a comparative molecular field analysis CoMFA) makes it possible to determine and visuahze molecular interaction regions involved in hgand-receptor binding [51]. Further on, statistical methods such as partial least squares regression PLS) are applied to search for a correlation between CoMFA descriptors and biological activity. The CoMFA descriptors have been one of the most widely used set of descriptors. However, their apex has been reached. 

It should represent the true potential accurately in the interaction regions for which experimental or nonempirical theoretical data are available. 

It should smoothly connect the asymptotic and interaction regions in a physically reasonable way. 

The problem used uniform cubical zones, 0.02 cm (5 projectile diameter) on a side, in the vicinity of the projectile/target interaction region. A total of 6,000,000 cells was used in the calculation, and the calculation required 100 CPU hours on a Cray/X-MP (416). 

It is unclear exactly how the two potential surfaces, and hence the interaction regions between them, behave as the parent molecules bend. Our experimental results indicate that the more bent the ozone molecules are as they dissociate the more effectively is the available energy channelled into the OA T, ) fragment vibration. It is possible that as the parent molecules bend, the crossing seams move to a region on the repulsive state that more strongly favors the production of vibrationally excited 02(3 ) fragments. 

Fig. 2. Schematic configuration space for the reaction AB + CD — A + BCD. R is the radial coordinate between the center-of-mass of the two diatoms, and r is the vibrational coordinate of the reactive AB diatom. I denotes the interaction region and II denotes the asymptotic region. The shaded regions are the absorption zones for the time-dependent wavefunction to avoid boundary reflections. The reactive flux is evaluated at the r = rB surface.

Furushima, R., Kita, K., Takamiya, S., Konishi, K., Aoki, T. and Oya, H. (1990) Structural studies on three flavin-interacting regions of the flavoprotein subunit of complex II in Ascaris suum mitochondria. FEBS Letters 263, 325-328. 

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