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INDEX BLAST searches

This program takes the S. cerevisiae reference sequence for each locus and runs a Blast search against the Rfam database. If there is a hit with an expectation value below some cutoff (default E < 10 the name of the matching database query is added as a new field to the data file. Please note that the locations of the sequence data files and the blast index files on the command-line must be specified. [Pg.519]

National Center for Biotechnology Information (NCBI) Various The Basic Local Alignment Search Tool (BLAST), for comparing gene and protein sequences against others in public databases http //www.ncbi.nlm.nih,gov/Tools/index.html... [Pg.168]

See other pages where INDEX BLAST searches is mentioned: [Pg.150]    [Pg.294]    [Pg.214]    [Pg.502]    [Pg.131]    [Pg.150]    [Pg.151]    [Pg.72]    [Pg.30]   
See also in sourсe #XX -- [ Pg.234 ]



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