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Evolution-mimicking Algorithm for the Improvement of Aptamers

An EMA consists of selection via an inhibition assay, crossover, and mutation of the oligonucleotide sequence in silica. Eirst, a set of 10 DNA sequences, each of which contains a portion of the original aptamer sequence as well as a randomized region, is generated by a computer and synthesized chemically. The inhibitory activity of each aptamer for the target enzyme is measured and [Pg.136]

Weinschenk, T., Priemer, M., Schluesener, H. (2001). Systematic evolution of a DNA aptamer binding to rat brain tumor microvessels selective targeting of endothelial regulatory protein pigpen. J Biol Client 276, 16464-16468. [Pg.137]

Drolet, D. W., Moon-McDermott, L., Romig, T. S. (1996). An enzyme-linked oligonucleotide assay. Nat. Biotechnol. 14, 1021-1025. [Pg.137]

Filipowicz, W. (2005). RNAi the nuts and bolts of the RISC machine. Cell, 122, 17-20. [Pg.137]

Furuta, M., Ito, T., Eguchi, C., Tanaka, T., Wakabayashi-Takai, E., Kaneko, K. (2002). Two-dimensional electrophoresis/phage panning (2D-PP) a novel technology for direct antibody selection on 2-D blots. J Biochem 132, 245-251. [Pg.137]


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