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Diffusion dynamics, shift from

The reaction space pertinent to our system is depicted in Figure 4. The proton is assumed to dissociate in the aqueous layer and diffuse in a three-dimensional space until its diffusion sphere contacts both membranes. At that point the diffusion loses its three-dimensional property and assumes a cylindrical configuration that, with respect to the volume increment between two shells, is identical to a two-dimensional diffusion. The shift from a three-to a two-dimensional space has a marked effect on the diffusion dynamics In the three-dimensional space the density of a particle in a concentric shell varies as r-3, whereas in the two-dimensional space the density varies as r-2. Consequently the concentration gradient in three-dimensional space is larger and drives a better diffusion away from the center. [Pg.41]

Figure 2 shows the spectral response functions (5,(r), Eq. 1) derived firom the spectra of Fig. 1. In order to adequately display data for these varied solvents, whose dynamics occur on very different time scales, we employ a logarithmic time axis. Such a representation is also useful because a number of solvents, especially the alcohols, show highly dispersive response functions. For example, one observes in methanol significant relaxation taking place over 3-4 decades in time. (Mdtiexponential fits to the methanol data yield roughly equal contributions from components with time constants of 0.2, 2, and 12 ps). Even in sinqrle, non-associated solvents such as acetonitrile, one seldom observes 5,(r) functions that decay exponentially in time. Most often, biexponential fits are required to describe the observed relaxation. This biexponential behavior does not reflect any clear separation between fast inertial dynamics and slower diffusive dynamics in most solvents. Rather, the observed spectral shift usually appears to sirrply be a continuous non-exponential process. That is not to say that ultrafast inertial relaxation does not occur in many solvents, just that there is no clear time scale separation observed. Of the 18 polar solvents observed to date, a number of them do show prominent fast components that are probably inertial in origin. For example, in the solvents water [16], formamide, acetoniuile, acetone, dimethylformamide, dimethylsulfoxide, and nitromethane [8], we find that more than half of the solvation response involves components with time constants of 00 fs. Figure 2 shows the spectral response functions (5,(r), Eq. 1) derived firom the spectra of Fig. 1. In order to adequately display data for these varied solvents, whose dynamics occur on very different time scales, we employ a logarithmic time axis. Such a representation is also useful because a number of solvents, especially the alcohols, show highly dispersive response functions. For example, one observes in methanol significant relaxation taking place over 3-4 decades in time. (Mdtiexponential fits to the methanol data yield roughly equal contributions from components with time constants of 0.2, 2, and 12 ps). Even in sinqrle, non-associated solvents such as acetonitrile, one seldom observes 5,(r) functions that decay exponentially in time. Most often, biexponential fits are required to describe the observed relaxation. This biexponential behavior does not reflect any clear separation between fast inertial dynamics and slower diffusive dynamics in most solvents. Rather, the observed spectral shift usually appears to sirrply be a continuous non-exponential process. That is not to say that ultrafast inertial relaxation does not occur in many solvents, just that there is no clear time scale separation observed. Of the 18 polar solvents observed to date, a number of them do show prominent fast components that are probably inertial in origin. For example, in the solvents water [16], formamide, acetoniuile, acetone, dimethylformamide, dimethylsulfoxide, and nitromethane [8], we find that more than half of the solvation response involves components with time constants of 00 fs.
Studies of the effect of permeant s size on the translational diffusion in membranes suggest that a free-volume model is appropriate for the description of diffusion processes in the bilayers [93]. The dynamic motion of the chains of the membrane lipids and proteins may result in the formation of transient pockets of free volume or cavities into which a permeant molecule can enter. Diffusion occurs when a permeant jumps from a donor to an acceptor cavity. Results from recent molecular dynamics simulations suggest that the free volume transport mechanism is more likely to be operative in the core of the bilayer [84]. In the more ordered region of the bilayer, a kink shift diffusion mechanism is more likely to occur [84,94]. Kinks may be pictured as dynamic structural defects representing small, mobile free volumes in the hydrocarbon phase of the membrane, i.e., conformational kink g tg ) isomers of the hydrocarbon chains resulting from thermal motion [52] (Fig. 8). Small molecules can enter the small free volumes of the kinks and migrate across the membrane together with the kinks. [Pg.817]


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See also in sourсe #XX -- [ Pg.2 , Pg.3 ]




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Diffusion dynamics

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