Data Processing and Bioinformatics

Computational detection of protein complexes in AP-MS experiments. Proteomics 12 1663-1668. 

Harder, J., Tharakan, R., Kofeler, H. C., Graham, D. R., and Thallinger, G. G. 2012. Bioinformatics tools and challenges in structural analysis of lipido-mics MS/MS data. Briefings Bioinform. 10 1093. 

Nakayama, H., Takahashi, N., and Isobe, T. 2011. Informatics for mass spectrometry-based RNA analysis. Mass Spectrom. Rev. 30 1000-1012. 

Schadt, E. E., Linderman, M. D., Sorenson, J., Lee, L., and Nolan, P. 2010. Computational solutions to large-scale data management and analysis. Nat. Rev. Genet. 11 647-657. 

Mechref, Y., Hu, Y., Garcia, A., and Hussein, A. 2012. Identifying cancer biomarkers by mass spectrometry-based glycomics. Electrophoresis 12 1755-1767. 

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