Configuration of stereoisomers

How many alkenes have the molecular formula C5H10 Write their structures and give their lUPAC names. Specify the configuration of stereoisomers as cis or trans as appropriate. 

The appropriate representation of a molecule with RDF descriptors finally depends on the question of what the term similarity should describe in the given context. Let us have a look at the following example. Figure 5.8 shows three possible configurations of stereoisomers for a Ruthenium complex with sulfur dominated coordination sphere, a compound that serves as a model for nitrogenase. 

Chiral columns are also employed in pheromone research for the determination of the absolute configuration of stereoisomers. The configuration of 4-methylheptan-3-ol and 4-methylheptan-3-one, sex pheromones of the oak bark beetle, were determined using a fused silica column coated with octakis [6-0-methyl-2,3-di-0-pentyl]-7-cyclodextrin. The elution order of the ketone stereoisomers was determined according to the literature and the natural compound was found to be (S)-methylheptanone. The absolute configuration of the alcohol present in the insects was determined by comparison with authentic standards and was found to be (3R, 4S)-methylheptanol. 

The pair of isomers designated as and trans 2 butene have the same constitution both have an unbranched carbon chain with a double bond connecting C 2 and C 3 They differ from each other however m that the cis isomer has both of its methyl groups on the same side of the double bond but the methyl groups m the trans isomer are on oppo site sides of the double bond Recall from Section 3 11 that isomers that have the same constitution but differ m the arrangement of their atoms m space are classified as stereoisomers as 2 Butene and trans 2 butene are stereoisomers and the terms as and trans specify the configuration of the double bond... 

Isomeric alkenes may be either constitutional isomers or stereoisomers There is a sizable barrier to rotation about a carbon-carbon double bond which corresponds to the energy required to break the rr component of the double bond Stereoisomeric alkenes are configurationally stable under normal conditions The configurations of stereoisomeric alkenes are described according to two notational systems One system adds the prefix CIS to the name of the alkene when similar substituents are on the same side of the double bond and the prefix trans when they are on opposite sides The other ranks substituents according to a system of rules based on atomic number The prefix Z is used for alkenes that have higher ranked substituents on the same side of the double bond the prefix E is used when higher ranked substituents are on opposite sides... 

Eleven chirality centers may seem like a lot but it is nowhere close to a world record It is a modest number when compared with the more than 100 chirality centers typ ical for most small proteins and the thousands of chirality centers present m nucleic acids A molecule that contains both chirality centers and double bonds has additional opportunities for stereoisomerism For example the configuration of the chirality center m 3 penten 2 ol may be either R or S and the double bond may be either E or Z There fore 3 penten 2 ol has four stereoisomers even though it has only one chirality center... 

Thiol (Section 15 13) Compound of the type RSH or ArSH Th reo (Section 7 11) Term applied to the relative configuration of two stereogenic centers within a molecule The threo stereoisomer has like substituents on opposite sides of a Fischer projection... 

DUactide (5) exists as three stereoisomers, depending on the configurations of the lactic acid monomer used. The enantiomeric forms whereia the methyl groups are cis are formed from two identical lactic acid molecules, D- or L-, whereas the dilactide formed from a racemic mixture of lactic acid is the opticaUy iaactive meso form, with methyl groups trans. The physical properties of the enantiomeric dilactide differ from those of the meso form (6), as do the properties of the polymers and copolymers produced from the respective dilactide (23,24). 

Diastereomers include all stereoisomers that are not related as an object and its mirror image. Consider the four structures in Fig. 2.3. These structures represent fee four stereoisomers of 2,3,4-trihydroxybutanal. The configurations of C-2 and C-3 are indicated. Each stereogenic center is designated J or 5 by application of the sequence rule. Each of the four structures is stereoisomeric wife respect to any of fee others. The 2R R and 25,35 isomers are enantiomeric, as are fee 2R, iS and 25,3J pair. The 21 ,35 isomer is diastereomeric wife fee 25,35 and 2R,3R isomers because they are stereoisomers but not enantiomers. Any given structure can have only one enantiomer. All other stereoisomers of feat molecule are diastereomeric. The relative configuration of diastereomeric molecules is fiequently specified using fee terms syn and anti. The molecules are represented as extended chains. Diastereomers wife substituents on the same side of the extended chain are syn stereoisomers, whereas those wife substituents on opposite sides are anti stereoisomers. 

A study of the photolysis of A, B, and C has been reported. A gives both D and the cleavage product benzaldehyde. B gives only E. C gives benzaldehyde and the stereoisomer B. Discuss the ways in which the presence and configuration of the remote t-butyl group can control the product composition, and account for the formation of the observed products. 

Relative to each other, both hydroxyl groups are on the same side in Fischer projections of the erythrose enantiomers. The remaining two stereoisomers have hydroxyl groups on opposite sides in their Fischer projections. They are diastereomers of d- and L-erythrose and are called d- and L-threose. The d and l prefixes again specify the configuration of the highest numbered chirality center. D-Threose and L-threose are enantiomers of each other ... 

What are the configurations (R or S) of the chiral carbons in each stereoisomer Does internal rotation affect the configuration of a chiral atom Why or why not ... 

Table sugar, sec Sucrose Tagatose, structure of, 975 Talose. configuration of, 982 Tamiflu, molecular model of, 130 Tamoxifen, synthesis of, 744 Till] DNA polymerase, PCR and, 1117 Tartaric acid, stereoisomers of, 305-306... 

Threonine, stereoisomers of, 302-303 structure and properties of, 1019 Threose. configuration of, 982 molecular model of, 294 Thromboxane B2. structure of,... 

The palladium-catalyzed cyclization of compound 138 amply demonstrates the utility of the Stille reaction as a macrocyclization method (see Scheme 37). This efficient ring closure is just one of many examples disclosed by J.E. Baldwin and his group at Oxford.58 Interestingly, compound 138 can be employed as a stereoisomeric mixture of vinylstannanes because both stereoisomers converge on the same cyclized product. To rationalize this result, it was suggested that the configuration of the vinylstannane moiety is conserved in the cyclization, but that the macrocycle resulting from the (Z)-vinylstannane stereoisomer isomerizes to the thermodynamically favored trans product under the reaction condi-... 

Pyrethrolone and cinerolone make up the keto alcohol moiety of the pyrethrins. Both of these keto alcohols have one asymmetric carbon at the 4-position and a double bond in the side chain which is capable of cis-trans isomerism in the 2-position. It is possible, therefore, to have four stereoisomers for each keto alcohol. Katsuda et al. (22) show that only the ( + ) form occurs in the natural esters. Elliott (8) has shown recently, by a new procedure developed to obtain pure ( + ) pyrethrolone, that the hitherto unidentified prye-throlone C is in reality pyrethrolone contaminated with thermally isomerized material. (+) Pyrethrolone forms a crystalline monohydrate from which the pure alcohol is obtained. The natural configurations of the keto alcohols in the esters are insecticidally more active, as is the case with the acid moiety. 

A9-THC (2.1 in Fig. 2) is the only major psychoactive constituent of C. sativa. It is a pale yellow resinous oil and is sticky at room temperature. A9-THC is hpophihc and poorly soluble in water (3 p,g mL ), with a bitter taste but without smell. Furthermore it is sensitive to light and air [4]. Some more physical and chemical data on A9-THC are fisted in Table 1. Because of its two chiral centers at C-6a and C-lOa, four stereoisomers are known, but only (-)-trans-A9-THC is foimd in the Cannabis plant [5]. The absolute configuration of the... 

Owing to the concerted mechanism, chirality at C(3) [or C(4)] leads to enantiospecific formation of new stereogenic centers formed at C(l) [or C(6)].203 These relationships are illustrated in the example below. Both the configuration of the new stereocenter and the new double bond are those expected on the basis of a chairlike TS. Since there are two stereogenic centers, the double bond and the asymmetric carbon, there are four possible stereoisomers of the product. Only two are formed. The Zs-double bond isomer has the 5-con figuration at C(4) and the Z-isomer has the -configuration. These are the products expected for a chair TS. The stereochemistry of the new double bond is determined by the relative stability of the two chair TSs. TS B is less favorable than A because of the axial placement of the larger phenyl substituent. 

The synthesis in Scheme 13.13 leads diastereospecifically to the erythro stereoisomer. An intramolecular enolate alkylation in Step B gave a bicyclic intermediate. The relative configuration of C(4) and C(7) was established by the hydrogenation in Step C. The hydrogen is added from the less hindered exo face of the bicyclic enone. This reaction is an example of the use of geometric constraints of a ring system to control relative stereochemistry. 

---