Basic Cleavage Conditions

A variety of cleavage conditions have been reported for the release of amines from a solid support. Triazene linker 52 prepared from Merrifield resin in three steps was used for the solid-phase synthesis of aliphatic amines (Scheme 22) [61]. The triazenes were stable to basic conditions and the amino products were released in high yields upon treatment with mild acids. Alternatively, base labile linker 53 synthesized from a-bromo-p-toluic acid in two steps was used to anchor amino functions (Scheme 23) [62]. Cleavage was accomplished by oxidation of the thioether to the sulfone with m-chloroperbenzoic acid followed by 13-elimination with a 10% solution of NH4OH in 2,2,2-trifluoroethanol. A linker based on l-(4,4 -dimethyl-2,6-dioxocyclohexylidene)ethyl (Dde) primary amine protecting group was developed for attaching amino functions (Scheme 24) [65]. Linker 54 was stable to both acidic and basic conditions and the final products were cleaved from the resin by treatment with hydrazine or transamination with ra-propylamine. 

Numerous researchers have employed thiols as weak bases in the thioalkylation reaction to ligate unprotected peptides with a haloacetyl group to form thioethers at pH 7 8.5[90 91 131-133 or thioesters at acidic to basic conditions. 108"110 Of these two reactions, thioether formation is often the choice because thioesters suffer from instability in aqueous basic conditions. Haloacetyl derivatives, either as carboxylic acids or active esters, can be attached to either the N-terminal or side-chain amines during the stepwise solid-phase synthesis of either the peptide or the core and are stable to either HF or TFA cleavage conditions. Capping an amino group with a chloroacetyl group is compatible with Fmoc chemistry when used at a terminal step. 

Selective bromine-mediated addition of BOC-protected-guanidine 81 to dihydropyridine 56 occurs across the electron-rich 5,6-alkene to give, after acid deprotection, r-2-amino-l,3a,5,7a-dihydroimidazo[4,5-b]pyridine 82 (Scheme 23). Aminal bond cleavage under basic conditions affords substituted 2-aminoimidazole 83 <2004OL3933>. Replacement of guanidine 81 with urea or thiourea leads, similarly, to 2-aminooxazoles or 2-ami-nothiazoles, respectively however, the yields are considerably lower than that of 82 due to the sensitivity of the ureas to bromine oxidation <2005JOC8208>. 

Acrylates can also be used in Michael addition with primary amine and, after further reaction with isothiocyanate, supported thioureas are isolated. These can then undergo a cleavage under basic conditions leading to cyclisation and formation of tetrahydrothioxopyrimidinones [129], Onium salts supported isothiocyanates can also be used with this methodology and lead to the formation of various guanidines [130] (Fig. 41). 

Conditions for auxiliary removal have to be carefully chosen to avoid partial racemization of the newly formed stereogenic center. Such complications arise under reductive cleavage conditions (lithium aluminum hydride/diethyl ether) as well as basic hydrolysis employing potassium hydroxide in ethanol. However, treatment with lithium hydroxide in aqueous tetra-hydrofuran appears to effect clean cleavage whilst avoiding this complication713. 

The cleavage of fused pyrazines represents an important method of synthesis of substituted pyrazines, particularly pyrazinecarboxylic acids. Pyrazine-2,3-dicarboxylic acid is usually prepared by the permanganate oxidation of either quinoxalines or phenazines. The pyrazine ring resembles the pyridine ring in its stability rather than the other diazines, pyridazine and pyrimidine. Fused systems such as pteridines may easily be converted under either acidic or basic conditions into pyrazine derivatives (Scheme 75). 

According to a kinetic study which included (56), (56a) and some oxaziridines derived from aliphatic aldehydes, hydrolysis follows exactly first order kinetics in 4M HCIO4. Proton catalysis was observed, and there is a linear correlation with Hammett s Ho function. Since only protonated molecules are hydrolyzed, basicities of oxaziridines ranging from pii A = +0.13 to -1.81 were found from the acidity rate profile. Hydrolysis rates were 1.49X 10 min for (56) and 43.4x 10 min for (56a) (7UCS(B)778). O-Protonation is assumed to occur, followed by polar C—O bond cleavage. The question of the place of protonation is independent of the predominant IV-protonation observed spectroscopically under equilibrium conditions all protonated species are thermodynamically equivalent. 

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