Chemical source term Jacobian matrix

We will also need to define the Jacobian matrix of the chemical source term J with components... 

In this section, we first introduce the standard form of the chemical source term for both elementary and non-elementary reactions. We then show how to transform the composition vector into reacting and conserved vectors based on the form of the reaction coefficient matrix. We conclude by looking at how the chemical source term is affected by Reynolds averaging, and define the chemical time scales based on the Jacobian of the chemical source term. 

The chemical time scales can be defined in terms of the eigenvalues of the Jacobian matrix of the chemical source term.27 For example, for an isothermal system the K x K Jacobian matrix of the chemical source term is given by d S... 

ODE solver. Relative to non-stiff ODE solvers, stiff ODE solvers typically use implicit methods, which require the numerical inversion of an Ns x Ns Jacobian matrix, and thus are considerably more expensive. In a transported PDF simulation lasting T time units, the composition variables must be updated /Vsm, = T/At 106 times for each notional particle. Since the number of notional particles will be of the order of A p 106, the total number of times that (6.245) must be solved during a transported PDF simulation can be as high as A p x A sim 1012. Thus, the computational cost associated with treating the chemical source term becomes the critical issue when dealing with detailed chemistry. 

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