Catalysis amino

Amino acid side chains with pK, values below 7, such as aspartic acid or glutamic acid, will be deprotonated at pH 7 and, therefore, wiU be used normally in general base catalysis. Amino acid side chains with pK, values above 7, such as lysine or tyrosine, will be protonated at pH 7 and, therefore, will be used normally in general acid catalysis. The imidazole side chain of histidine has a pKa value of 6-8 and, therefore, might... 

Figure 2 Primary sequences of human and bovine DNase I. Identical residues are not mentioned for the bovine sequence and are indicated (-) homologous residues have a point ( ) above their symbol in the bovine sequence. The arrow at Asnl8 shows the glycosylation site. Residues marked with an asterisk ( ) are involved in the catalysis. Amino acids in bold take part in the DNA binding, while the shaded residues participate in the interaction with actin. The Ca2+ binding regions are outlined.

Nature provides striking examples of each of the types of PCET discussed in this chapter. Enzymes often rely on PCET to affect primary metabolic steps involving charge transport and catalysis. Amino acid radical generation and transport is synonymous with PCET [187], as is the activation of substrate bonds at enzyme active sites [29]. PCET is especially prevalent for metallo-cofactors that activate... 

Edsall, J. T. George Scatchard, John G. Kirkwood, and the electrical interactions of amino acids and proteins. Trends Biochem. Sci. 7 (1982) 414-416. Eigen, M. Proton transfer, acid-base catalysis, and enzymatic hydrolysis. Angew. Chem. Int. Ed. Engl. 3 (1964) 1-19. 

Effects of L- -amino acid ligands - Stepping on the tail of enantioselectivity The naturally occurring -amino acids form a class of readily available strongly coordinating ligands, which exhibit broad stmctural variation. Moreover, their availability in enantiomerically pure form offers opportunities for enantioselective catalysis. Some derivatives of these compounds have been... 

In a second attempt to extend the scope of Lewis-acid catalysis of Diels-Alder reactions in water, we have used the Mannich reaction to convert a ketone-activated monodentate dienophile into a potentially chelating p-amino ketone. The Mannich reaction seemed ideally suited for the purpose of introducing a second coordination site on a temporary basis. This reaction adds a strongly Lewis-basic amino functionality on a position p to the ketone. Moreover, the Mannich reaction is usually a reversible process, which should allow removal of the auxiliary after the reaction. Furthermore, the reaction is compatible with the use of an aqueous medium. Some Mannich reactions have even been reported to benefit from the use of water ". Finally, Lewis-acid catalysis of Mannich-type reactions in mixtures of organic solvents and water has been reported ". Hence, if both addition of the auxiliary and the subsequent Diels-Alder reaction benefit from Lewis-acid catalysis, the possibility arises of merging these steps into a one-pot procedure. 

As anticipated from the complexation experiments, reaction of 4.42 with cyclopentadiene in the presence of copper(II)nitrate or ytterbium triflate was extremely slow and comparable to the rate of the reaction in the absence of Lewis-acid catalyst. Apparently, Lewis-acid catalysis of Diels-Alder reactions of p-amino ketone dienophiles is not practicable. 

Nucleophilic Ring Opening. Opening of the ethyleneimine ring with acid catalysis can generally be accompHshed by the formation of an iatermediate ayiridinium salt, with subsequent nucleophilic substitution on the carbon atom which loses the amino group. In the foUowiag, R represents a Lewis acid, usually A = the nucleophile. 

En me Mechanism. Staphylococcal nuclease (SNase) accelerates the hydrolysis of phosphodiester bonds in nucleic acids (qv) some 10 -fold over the uncatalyzed rate (r93 and references therein). Mutagenesis studies in which Glu43 has been replaced by Asp or Gin have shown Glu to be important for high catalytic activity. The enzyme mechanism is thought to involve base catalysis in which Glu43 acts as a general base and activates a water molecule that attacks the phosphodiester backbone of DNA. To study this mechanistic possibiUty further, Glu was replaced by two unnatural amino acids. 

Most of the reactions occurring at the amino group of the cyanamide molecule requite the anionic species, —N=C=N or HN C=N, sometimes in equivalent amount and occasionally as provided by base catalysis. Therefore, the process conditions for dimerization should be created to avoid the use of any metal salt, such as mono sodium phosphate (4). 

An example of a pseudoirreversible inhibitor has been demonstrated for chymotrypsin (36). This enzyme is a serine protease, and its mechanism of catalysis may be outlined as follows, where or R2 preferentially is a hydrophobic amino acid residue. 

Jap-KIingermarm reactions, 4, 301 oxidation, 4, 299 reactions, 4, 299 synthesis, 4, 362 tautomerism, 4, 38, 200 Indole, 5-amino-synthesis, 4, 341 Indole, C-amino-oxidation, 4, 299 tautomerism, 4, 298 Indole, 3-(2-aminobutyl)-as antidepressant, 4, 371 Indole, (2-aminoethyl)-synthesis, 4, 278 Indole, 3-(2-aminoethyl)-synthesis, 4, 337 Indole, aminomethyl-reactions, 4, 71 Indole, 4-aminomethyl-synthesis, 4, 150 Indole, (aminovinyl)-synthesis, 4, 286 Indole, 1-aroyl-oxidation, 4, 57 oxidative dimerization catalysis by Pd(II) salts, 4, 252 Indole, 1-aroyloxy-rearrangement, 4, 244 Indole, 2-aryl-nitration, 4, 211 nitrosation, 4, 210 synthesis, 4, 324 Indole, 3-(arylazo)-rearrangement, 4, 301 Indole, 3-(arylthio)-synthesis, 4, 368 Indole, 3-azophenyl-nitration, 4, 49 Indole, 1-benzenesulfonyl-by lithiation, 4, 238 Indole, 1-benzoyl photosensitized reactions with methyl acrylate, 4, 268 Indole, 3-benzoyl-l,2-dimethyl-reactions... 

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