Amino acids carboxylic oxygens

Electrochemical studies performed in the 7 x Cys-Aspl4 D. afri-canus Fdlll indicate that the reduced [3Fe-4S] center can react rapidly with Fe to form a [4Fe-4S] core that must include noncysteinyl coordination (101). The carboxylate side chain of Asp 14 was proposed as the most likely candidate, since this amino acid occupies the cysteine position in the typical sequence of a 8Fe protein as indicated before. The novel [4Fe-4S] cluster with mixed S and O coordination has a midpoint redox potential of 400 mV (88). This novel coordinated state with an oxygen coordination to the iron-sulfur core is a plausible model for a [4Fe-4S] core showing unusual spin states present in complex proteins (113, 114). 

The p-pleated sheet structure occurs in fibrous as well as globular proteins and is formed by intermolecular hydrogen bonds between a carboxyl group oxygen of one amino acid and an amine hydrogen of an adjacent polypeptide chain. Parallel p-pleated sheets form when the adjacent polypeptide chains are oriented in one direction (from N-terminal to C-terminal end or vice versa). Antiparallel p-pleated... 

The regioselective reductive ring opening of, V-substitutcd aziridine-2-carboxylates gives either a- or //-amino acids.122 Heteronucleophiles such as nitrogen,123 oxygen,124 sulfur,125 and chloride preferably attack the C-3 position to provide a-amino acid derivatives. However, a mixture of products will result when carbanion or azide is used as the nucleophile (Scheme 4-62). 

Peptide bond formation involves activation of the carboxyl group of an amino acid residue, followed by aminolysis of the activated residue by the amino group of a second amino acid residue. Two types of activated molecules are recognized those that are not detectable but are postulated and those that are detectable and can be isolated. Postulated intermediates are necessary to account for the formation of the detectable intermediates. The postulated intermediates are consumed as fast as they are formed, either by aminolysis by an amino group or by nucleophilic attack by an oxygen nucleophile, which produces activated molecules that are also immediate precursors of the peptide. More than one activated compound may be generated by a postulated intermediate. Activated esters, acyl halides and azides, and mixed and symmetrical anhydrides are isolatable activated compounds that are generated from postulated intermediates. Peptides are produced by one of three ways ... 

---