Unperturbed donor quantum yield

Thus, E is defined as the product of the energy transfer rate constant, ku and the fluorescence lifetime, xDA, of the donor experiencing quenching by the acceptor. The other quantities in Eq. (12.1) are the DA separation, rDA the DA overlap integral, / the refractive index of the transfer medium, n the orientation factor, k2 the normalized (to unit area) donor emission spectrum, (2) the acceptor extinction coefficient, eA(k) and the unperturbed donor quantum yield, QD. 

We now focus our attention on the presence of the unperturbed donor quantum yield, Qd, in the definition of R60 [Eq. (12.1)]. We have pointed out previously [1, 2] that xd appears both in the numerator and denominator of kt and, therefore, cancels out. In fact, xo is absent from the more fundamental expression representing the essence of the Forster relationship, namely the ratio of the rate of energy transfer, kt, to the radiative rate constant, kf [Eq. (12.3)]. Thus, this quantity can be expressed in the form of a simplified Forster constant we denote as rc. We propose that ro is better suited to FRET measurements based on acceptor ( donor) properties in that it avoids the arbitrary introduction into the definition of Ra of a quantity (i />) that can vary from one position to another in an unknown and indeterminate manner (for example due to changes in refractive index, [3]), and thereby bypasses the requirement for an estimation of E [Eq. (12.1)]. 

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See also in sourсe #XX -- [ ]

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