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Single nucleotide polymorphism differential expression

In Chap. 10, McFarlane et al. utilize liquid chromatography (LC)-MS to generate intact protein expression profiles as a snapshot of expressed proteins in a wide range of bacterial samples. Subsequent top-down proteomic analysis by LC-tandem MS allows identification of expressed serovar-specific proteins, resulting from nonsyn-onymous single-nucleotide polymorphisms (SNPs). Closely related, unsequenced or bacterial strains with newly acquired SNPs and plasmid proteins can be successfully differentiated by this multiplexed approach. [Pg.5]


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