Segmental diffusion chain rigidity

Figure 3 Calculated X-ray diffuse scattering patterns from (a) a full molecular dynamics trajectory of orthorhombic hen egg white lysozyme and (b) a trajectory obtained by fitting to the full trajectory rigid-body side chains and segments of the backbone. A full description is given in Ref. 13.

In spin-diffusion studies it is possible to detect not only two but three domain sizes. The third domain can be considered the interface (i) between the other two domains, which can be different chemical species in a polymer blend or rigid crystalline (r) and mobile amorphous (m) material in a semicrystalline polymer. To illustrate this point, a mobility timescale is depicted in Fig. 7.2.25(a) and the simplified ID domain structure of PE underneath in (b). Rigid crystalline and mobile amorphous materials exhibit motion of chain segments with different correlation times Tc. The chains at the interface between both domains exhibit intermediate mobility. The exact ranges of correlation times in the individual domains depend on the particular choice of filters. Therefore, the values of domain sizes derived through spin-diffusion NMR also depend on the type of filters used. In particular, the interface is defined solely by the NMR experiment and can only be detected if the filters are properly chosen. 

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