Scoring in docking

Evaluation of PMF Scoring in Docking Weak Ligands to the FK506 Binding Protein. 

Muegge I, Martin YC, Hajduk PJ, Fesik SW. Evaluation of PMF scoring in docking weak ligands to the FK506 binding protein. J Med Chem 1999 42 2498-503. 

Fig. 12.23 Two simple scoring functions used in docking. On the left is the basic scoring scheme used by the DOCK program [Desjarlais et al. 1988], On the right is the piecewise linear potential [Cclhaar et al. 1995],...

Kitchen DB, Decornez H, Furr JR, Bajorath J. Docking and scoring in virtual screening for drug discovery methods and applications. Nat Rev Drug Discov 2004 3(ll) 935-49. 

Muegge I, Enyedy I. Docking and scoring. In Tollenaere J, de Winter H, Langenaeker W, Bultinck P, editors. Computational medicinal chemistry and drug discovery. New York Marcel Dekker. 2004. p. 405-36. 

Krovat EM, Steindl T, Danger T. Recent advances in docking and scoring. Curr Comput Aided Drug Des 2005 1 93-102. 

Muegge, I. and Rarey, M. Small molecule docking and scoring. In... 

Muegge, I. and Enyedy, I. Docking and scoring. In Computational Medicinal Chemistry and Drug Discovery,... 

An analysis of critical factors affecting docking and scoring, in (Alvarez, J., Shoichet, B., eds.) Virtual screening in drug discovery. CRC Press, Boca Raton, FL, pp. 47-85. 

Kitchen, D.B., Decornez, H., Furr, J.R., Bajorath, J. Docking and Scoring in Virtual Screening for Drug Discovery Methods and Applications. Nat. Rev. Drug Discov. 2004, 77, 935-949. 

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