Protein coating

Vibrio (i) Curved, rod-shaped bacterial cell, (ii) Bacterium of the genus Vibrio. Virion Virus particle the virus nucleic acid surrounded by protein coat and in some cases other material. 

Virus Any of a large group of submicroscopic infective agents that typically contain a protein coat sunounding a nucleic acid core and are capable of growth only in a living cell. 

FIGURE 1.25 The virus life cycle. Viruses are mobile bits of genetic iuformatiou encapsulated in a protein coat. The genetic material can be either DNA or RNA. Once this genetic material gains entry to its host cell, it takes over the host machinery for macromolecular synthesis and subverts it to the synthesis of viral-specific nucleic acids and proteins. These virus components are then assembled into mature virus particles that are released from the cell. Often, this parasitic cycle of virus infection leads to cell death and disease. 

Tannic acid is a strong inhibitor of virus particles in vitro. It inactivated both TMV and TMV-RNA by forming noninfectious complexes (1). TMV-RNA was much more sensitive to inactivation than was whole TMV. It would thus appear that tannic acid could possibly inactivate TMV by reacting with either the protein coat or the RNA core. 

A bacteriophage (or phage) is a vims, made up of aDNA or RNA core and a protein coat that may infect bacteria. 

Belotserkovskii B.P., Zarling D.A. Peptide nucleic acid (PNA) facilitates multistranded hybrid formation between linear double-stranded DNA targets and RecA protein-coated complementary single-stranded DNA probes. Biochemistry 2002 41 3686-3692. 

The protein that stores iron in the body is called ferritin. A ferritin molecule consists of a protein coat and an iron-containing core. The outer coat is made up of 24 pol3q5eptide chains, each with about 175 amino acids. As Figure 20-27 shows, the pol q5eptides pack together to form a sphere. The sphere is hollow, and channels through the protein coat allow movement of iron in and out of the molecule. The core of the protein contains hydrated iron(HI) oxide, FC2 O3 H2 O. The protein retains its shape whether or not iron is stored on the inside. When filled to capacity, one ferritin molecule holds as many as 4500 iron atoms, but the core is only partially filled under normal conditions. In this way, the protein has the capacity to provide iron as needed for hemoglobin s mthesis or to store iron if an excess is absorbed by the body. 

The viral protein coat, or capsid, is composed of a large number of subunits, the capsomeres. This subunit structure is a fundamental property and is important from a number of aspects. 

In addition to the protein coat, many animal vims particles are surrounded by a hpoprotein envelope which has generally been derived fiom the cytoplasmic membrane of their last host cell. 

Guilbault G, Ngeh-Ngwainbi J, Foley P, et al. 1986. Use of protein coatings on piezoelectric crystals for assay of gaseous pollutants. Anal Chem Symp Ser Electrochem Sens Anal 25 335-341. 

The eclipse is the period during which the stages of virus multiplication occur. This is called the latent period, because no infectious virus particles are evident. Finally, maturation begins as the newly synthesized nucleic acid molecules become assembled inside protein coats. During the maturation phase, the titer of active virus particles inside the cell rises dramatically. At the end of maturation, release of mature virus particles occurs, either as a result of cell lysis or because of some budding or excretion process. The number of virus particles released, called the burst size, will vary with the particular virus and the particular host cell, and can range from a few to a few thousand. The timing of this overall virus replication cycle varies from 20-30 minutes in many bacterial viruses to 8-40 hours in most animal viruses. We now consider each of the steps of the virus multiplication cycle in more detail. 

As we have noted, the outcome of a virus infection is the synthesis of viral nucleic acid and viral protein coats. In effect, the virus takes over the biosynthetic machinery of the host and uses it for its own synthesis. A few enzymes needed for virus replication may be present in the virus particle and may be introduced into the cell during the infection process, but the host supplies everything else energy-generating system, ribosomes, amino-acid activating enzymes, transfer RNA (with a few exceptions), and all soluble factors. The virus genome codes for all new proteins. Such proteins would include the coat protein subunits (of which there are generally more than one kind) plus any new virus-specific enzymes. 

We might also note another important difference between animal and bacterial cells. Bacterial cells have rigid cell walls containing peptidoglycan and associated substances. Animal cells, on the other hand, lack cell walls. This difference is important for the way by which the virus genome enters and exits the cell. In bacteria, the protein coat of the virus remains on the outside of the cell and only the nucleic acid enters. In animal viruses, on the other hand, uptake of the virus often occurs by endocytosis (pinocytosis or phagocytosis), processes which are characteristic of animal cells, so that the whole virus particle enters the cell. The separation of animal virus genomes from their protein coats then occurs inside the cell. 

Subsequently, similar experiments were done with viral nucleic acids. The pure viral nucleic acid, when added to cells, led to the synthesis of complete virus particles the protein coat was not required. This process is called transfection. More recently, DNA has been used in cell-free extracts to program the synthesis of RNA that functions as the template for the synthesis of proteins characteristic of the DNA... 

Fig. 5.21 Cryoelectron micrograph of a single virus-like particle showing the well-defined protein coating of the 12 nm diameter Au nanoparticle (black disk). (Reprinted with permission from [98]. Copyright (2006) American Chemical Society).

Part of contents pertaining to the protein-coated beads is reproduced with permission from our article entitled Protein-embedding technique a potential approach to standardization of immunohistochemistry for formalin-fixed, paraffin-embedded tissue sections published in J. Histochem. Cytochem. 2005,53(9) 1167-1170. 

Virus Any of various submicroscopic pathogens consisting essentially of a core of a single nucleic acid surrounded by a protein coat, having the ability to replicate only inside a living cell. 

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