Polyketide examples

CJ Tsoi, C Khosla. Combinatorial biosynthesis of unnatural natural products the polyketide example. Chem Biol 2 355-362, 1995. 

Cytochrome P450 enzymes have been the subject of a number of recent reviews in which their mechanism and scope of action are covered in much detail [1, 6, 10, 11]. The reader is referred to these articles for a more thorough account of the mechanism and reactivity of cytochrome P450 enzymes, while we present a few representative examples of cytochrome P450-catalyzed epoxidation below. The enzymes we chose are all involved in the biosynthesis of polyketide natural products. Polyketides are a large, structurally diverse family of compounds and have provided a wealth of therapeutically useful drugs and drug leads. 

From the cultures of streptomycetes were isolated anthacyclinones like aklavi-none. Various aromatic polyketide antibiotics produced by fungi and bacteria have quinoid structures, for example, doxorubicin, rhodomycin, and actinorhodin. ... 

Nature gives us some illustrative examples of iterative methodologies in its biochemical mechanisms. The fatty acid-polyketide biosynthesis is one of them. The assembly of acyl units by sequential Claisen-type condensations to form a polyketide or fatty acid takes place at a multi-enzyme complex, at which the initial molecule is lengthened by one C2-unit per pass of a reaction cycle (Fig. 2). 

Leighton and coworkers [217] have also used this approach to develop efficient strategies for the synthesis of polyketide-derived natural products [218]. A main motif of these compounds is a skipped polyol structure, as in 6/2-94 this can easily be prepared by a novel Rh-catalyzed domino reaction of a diallylsilyl ether in the presence of CO, followed by a Tamao oxidation [219]. Thus, reaction of, for example, the silane 6/2-93, which is readily prepared from the corresponding ho-... 

Novel polyketides could also be generated by blocking certain catalytic domains of PKSs to allow bypass of the early steps in polyketide biosynthesis. In one example, the Cys729 —> Ala... 

A strategy based on the diastereoselective dipolar cycloaddition reaction of nitrile oxides and allylic alcoholates, has been applied to the synthesis of bis-(isoxazolines) that are precursors to polyketide fragments. These intermediates can be elaborated into protected polyols, for example, 439, by sequential chemos-elective reductive opening of each isoxazoline or, alternatively, by simultaneously, providing access to all stereoisomers of this carbon skeleton (479). 

These two syntheses are prominent examples of advanced synthetic strategies in which polyketides are assembled with only a limited number of C-C bond-forming steps and in which vinylogous aldol reactions play a pivotal role. Besides these syntheses a number of additional examples in which vinylogous aldol reactions were put forward, including Mannich-type reactions, have been published [48-54]. 

Scheme 24 Example of acyl carrier proteins (ACPs) in type I PKS. The 6-deoxyerythronolide B is shown as a representative polyketide. Seven ACPs are found in the seven modules, each depicted in a different color, responsible for the incorporation of the seven building block constituents of 6-deoxyerythronolide B.

The approach to polyketide synthesis described in Scheme 5.2 requires the relatively nontrivial synthesis of acid-sensitive enol acetals 1. An alternative can be envisioned wherein hemiacetals derived from homoallylic alcohols and aldehydes undergo dia-stereoselective oxymercuration. Transmetallation to rhodium could then intercept the hydroformylation pathway and lead to formylation to produce aldehydes 2. This proposal has been reduced to practice as shown in Scheme 5.6. For example, Yb(OTf)3-cata-lyzed oxymercuration of the illustrated homoallyhc alcohol provided organomercurial 14 [6]. Rhodium(l)-catalyzed hydroformylation of 14 proved successful, giving aldehyde 15, but was highly dependent on the use of exactly 0.5 equiv of DABCO as an additive [7]. Several other amines and diamines were examined with variation of the stoichiometry and none proved nearly as effective in promoting the reaction. This remarkable effect has been ascribed to the facilitation of transmetallation by formation of a 2 1 R-HgCl DABCO complex and the unique properties of DABCO when both amines are complexed/protonated. 

Fungi are traditionally considered in the botanical area, although they are genetically closer to animals. An example of fungal polyketide of current great interest is zaragozic acid. Its derivatives... 

Although far less numerous than the terpenoid/isoprenoid or polyketide NPs, the alkaloids (with an estimated 20,000 different structures) have a special place in NP research because a few are of great value to humans—for example, morphine, theobromine, caffeine, vincristine, quinine, codeine, cocaine, nicotine and strychnine. These often complex chemicals are found in about 20% of vascular plants and a smaller number of fungi, marine invertebrates and a few bacteria. ... 

Coumarins and isocoumarins appear to be of varied origins. Simple coumarins, such as umbelliferone, are formed by the shikimic acid pathway in which hydroxylation of p-hydroxycinnamic acid occurs. Other coumarins, for example alternariol (690), are derived from a polyketide unit, as are a number of chromanones, chromones, pyranones and isocoumarins (B-78MI22400). The biosynthesis of 5-hydroxy-2-methylchromone has been shown to involve the chromanone (60JCS654). However, isocoumarins are also derived from the mixed acetate-shikimate route, through initial cyclization of the polyketide and subsequent lactonization. 

Few examples have been reported of the preparation of oligomers by C-C bond formation. Reggelin described a synthetic protocol that enables the sequential stereo-controlled assembly of polyketides on cross-linked polystyrene (Figure 16.29 see also [273]). Flowever, this strategy involves many steps and only short polyketides have so far been prepared. Shorter and more efficient synthetic protocols will probably have to be developed to give access to larger and structurally more complex polyketides. 

Polyketides.1 Polyketides are useful as precursors to acetate-derived natural products, but they are unstable owing to a marked tendency to undergo internal condensation. A new synthesis involves ozonolysis of products of Birch reduction. An example is the synthesis of the polyketide 3 from the aromatic system 1. 

Collie s hypothesis that aromatic compounds are made biologically from ethanoic acid was greatly expanded by A. J. Birch to include an extraordinary number of diverse compounds. The generic name acetogenin has been suggested as a convenient classification for ethanoate (acetate)-derived natural products, but the name polyketides also is used. Naturally occurring aromatic compounds and quinones are largely made in this way. An example is 2-hydroxy-6-methylbenzoic acid formed as a metabolite of the mold Penicillium urticae ... 

---