Genomic sequence database

With the realization that there are only a limited number of stable folds and many unrelated sequences that have the same fold, biologically oriented computer scientists started to address what is called the inverse folding problem namely, which sequence patterns are compatible with a specific fold If this question can be answered, such patterns could be used to search through the genome sequence databases and extract those sequences that have a specific fold, such as the cx/p barrel or the immunoglobulin fold. 

In our unpublished genome sequence database for B. hermsii, we identified DNA sequences of the promoter for the flagellar rod protein (flgB-P), the promoter for the flagellin protein (flaB-P), and the variable tick protein gene (vtp). Sequences... 

Run the following command in the Linux/Unix console to install the genome sequence database ... 

Test whether Bowtie and the genome sequence database are successfully installed ... 

---