Double helix structural changes

An unusual photochemical reaction of 2-pyridones, 2-aminopyridinium salts and pyran-2-ones is photodimerization to give the so-called butterfly dimers. These transformations are outlined in equations (13) and (14). Photodimerization by [2+2] cyclization is also a common and important reaction with these compounds. It has been the subject of particular study in pyrimidines, especially thymine, as irradiation of nucleic acids at ca. 260 nm effects photodimerization (e.g. equation 15) this in turn changes the regular hydrogen bonding pattern between bases on two chains and hence part of the double helix structure is disrupted. The dimerization is reversed if the DNA binds to an enzyme and this enzyme-DNA complex is irradiated at 300-500 nm. Many other examples of [2+2] photodimerization are known and it has recently been shown that 1,4-dithiin behaves similarly (equation 16) (82TL2651). 

The free energy change in going from a double helix structure to two individual random coils is given by AG = AH-T AS... 

The way people think about DNA and genetics changed fundamentally when James Watson and Francis Crick suggested the double helix structure which not only turned out to be correct but also provided the key for the deciphering of the genetic code and the whole science which we now call molecular biology. 

Xanthan is reported to undergo a chiroptically detected temperature or salt-driven conformational change from an ordered conformation at high salt and low temperature to a disordered conformation either associated with lowering the salt concentration, or with increasing the temperature (2-5). The primary structure of xanthan has been known for about a decade (6,7), but different structures have been suggested both for the ordered and disordered conformation. Some workers (8-13) conclude that the ordered conformation is double-stranded or double-helix, whereas others (14-17) claim that a single stranded description can account for the observed data under... 

The absorption coefficients of polynucleotides are different from those calculated from the sum of the mononucleotides in part this reflects the secondary structure. The abrupt increase in the absorption of DNA at the melting point, where the secondary structure changes from the double helix to a random coil, is well known. It is therefore... 

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