Definition of Enriched Regions in ChIP-Seq Experiments

Detection and Definition of Enriched Regions in ChIP-Seq Experiments 

Overrepresented Itanscription factor binding sites or modules 

Genome v/ide correlationa correlation with genome annotation 

Recently, the RMAP algorithm was published by Smith etal. [28]. It efficiently uses two different mapping criteria, both based on approximate matching of the read and the reference genome. 

The Genomatix Mining Station contains a mapping algorithm based on the Genomatix Genome Thesaums, a library of shortest unique sub-words in the 

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