Conditional probability, compartmentalized

Aimed at facilitating probability calculation, but mostly aimed at compartmentalizing discipline-specific knowledge, the above PBEE framework should choose intermediate variables EDP and DM), so that conditional probabilities... 

Glycogen and its enzymes are compartmentalized. Glycogen granules are only present in astrocytes of adult animals but are found in both astrocytes and neurons of immature animals. Of the enzymes involved in glycogen metabolism, glycogen phosphorylase is found in astrocytes only. Under steady-state conditions, it is probable that less than 10% of phosphorylase in brain is in the unphosphorylated b form (requiring AMP). This form is probably not very active at the low AMP concentrations present when intracellular glucose is sufficient to maintain ATP synthesis. Brain phosphorylase b kinase is activated indirectly by cAMP and by the molar concentrations... 

An important property of the stochastic version of compartmental models with linear rate laws is that the mean of the stochastic version follows the same time course as the solution of the corresponding deterministic model. That is not true for stochastic models with nonlinear rate laws, e.g., when the probability of transfer of a particle depends on the state of the system. However, under fairly general conditions the mean of the stochastic version approaches the solution of the deterministic model as the number of particles increases. It is important to emphasize for the nonlinear case that whereas the deterministic formulation leads to a finite set of nonlinear differential equations, the master equation... 

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