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Bump checking

Wendoloski, Salemme [318] Borrowed from similar backbone segments of 5-9 aa in PDB Simple bump check Placed in order of highest probability first according to segment matching + steric checks 3 self-bb proteins 59, 53, 70% xi 54, 39, 59% xi... [Pg.196]

Bump Check, percussion cone (q.v.) Bung. (1) A vertical stack of saggars or of ware. [Pg.44]

Finally, the geometric constraints that must be met are specified. The constraints are the acceptable ranges of distances, angles, torsional angles, and plane angles. Distance constraints may be specified between points, between a point and a line, or between a point and a plane. Also, at one point in the distance comparison, one may specify any atom of the molecule to allow for primitive bump checking. Thus, the geometric search is deliberately flexible. [Pg.244]

Programmable "Bump Check" reminder alerts users when unit is past due... [Pg.108]

ChemDBS-3D uses rule-based systematic conformational analysis (single = 3, alpha 4, double/conjugated = 2 points) or random rule-based (max. time 2 min), or flexifit (no VDW bump check) ISIS/3D and UNITY use torsional minimization (conformationally flexible searching and directed tweak, respectively. [Pg.84]

See other pages where Bump checking is mentioned: [Pg.480]    [Pg.165]    [Pg.117]    [Pg.75]    [Pg.195]    [Pg.87]    [Pg.3]    [Pg.464]    [Pg.119]    [Pg.539]    [Pg.540]    [Pg.12]    [Pg.490]    [Pg.491]    [Pg.82]    [Pg.82]    [Pg.82]    [Pg.82]    [Pg.83]    [Pg.84]    [Pg.547]   
See also in sourсe #XX -- [ Pg.244 ]



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