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Binding affinity prediction algorithm

Bradbury S, Kamenska V, Schmieder PK, Ankley G, Mekenyan O. A computationally based identification algorithm for estrogen receptor ligands Part 1. Predicting hERalpha binding affinity. Toxicol Sci 2000 58 253-69. [Pg.177]

Figure 11.6. Calculation of the binding affinity of undecapeptide amides to HLA class II molecules by the prediction algorithm Actipat . The contribution of every amino add residue according to its sequence position is indicated by the value taken from the allele-specific Activity Patterns of the peptide library. Figure 11.6. Calculation of the binding affinity of undecapeptide amides to HLA class II molecules by the prediction algorithm Actipat . The contribution of every amino add residue according to its sequence position is indicated by the value taken from the allele-specific Activity Patterns of the peptide library.
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