Analyzing Protein-Ligand Interactions Using Pharmacophore Fingerprints

Analyzing Protein-Ligand Interactions Using Pharmacophore Fingerprints 

Deng et al. [18] recently described an approach to representing and analyzing 3D protein-ligand binding interactions. The Structural Interaction Fingerprint (SIFt see also Chapter 10) method represents a ligand by the interactions it un- 

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The use of 3D pharmacophore fingerprints in CADD applications can be broadly classified into the areas of design of combinatorial focused/diverse libraries, analyzing ligand-protein interactions and virtual HTS (vHTS) and protein selectivity. 

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