AMoRe molecular replacement

Navaza J. AMORE—an automated package for molecular replacement. Acta Cryst. 1994 A50 157-63. 

Protocol 7.3 A typical molecular replacement session using AMoRe (Navaza, 2001) ... 

Navaza, J. (2001) Implementation of molecular replacement in AmoRe. Acta Crystallogr. D 57,1367-1372. 

Navaza, J. and Saludjian, P. (1997) AmoRe an automated molecular replacement package. Method Enzymol. T7k, 581-594. 

A molecular replacement solution was found with AMoRe (44) using, as a search model, a monomer from the 2.2 A structure of -Ppol with the domain swapped carboxy terminus tail removed (residues 2-144 from monomer A of PDB id 1A74) (40, 45). The search was conducted versus 15 - 3.5 A resolution data set taken from a crystal collected at room temperature to 2.2 A. (This crystal was grown under the same conditions described above and was mounted in a glass capilliary without soaking in cryoprotection or metal ion solutions.) The solution was then inspected in O (46) to look for symmetry clashes and the model was expanded to include the C-terminal tail from each monomer. 

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