Alignment tool

A number of turbomaehinery users have speeified Pilgrim s CHAT (Coupling Hole Alignment Tool, Figure 6-33), in addition to radial fit bolts. CHAT is a further development of the radial fit bolt, designed to aehieve eoupling hole alignment in the least amount of time and to a toleranee that permits radial bolt assembly. The CHAT tool is based on the same prineiple as the bolt and also uses hydraulie power. 

Figure 6-33. The coupling hole alignment tool (CHAT) has a longitudinally split sleeve for greater expansion. Like the radial fit bolt, it is hydraulically tensioned, but there is no hydraulic separation of core and sleeve.

Alignment using mechanical alignment tools may be used to maintain alignment of the joint to be brazed. 

Furthermore the docking poses were used as an alignment tool for the generation of a 3D-QSAR model which was able to quantitative explain the different affinity of the ligands. 

R. D. Hoffmann, R. D., Langer, T. Use of the CATALYST Program as a New Alignment Tool for 3D QSAR. In QSAR and Molecular Modelling Concepts,Computational Tools and Bidogical Applications, Sanz, F., Giraldo, J., Manaut F. (eds), PROUS Science Publishers, Barcelona, 1995, pp. 466-469. 

Figure 9.8 Alignment tool for positioning of alight beam.

Select the Generate Structural Alignment tool of the Fit menu to initiate the sequence alignment which can be viewed by clicking the little text icon. 

Invoke the Generate Structure Alignment tool of the Fit menu. 

CLUSTALW is a sequence alignment tool, which takes as input a set of sequences and produces a multiple alignment of those sequences. 

Kent, W. J. (2002) BLAT—the BLAST-like alignment tool. Genome Res. 12, 656-664. 

Key Words Multiple alignment alignment tool evolutionary conservation conserved elements conserved transcription factor binding sites. 

The multiple alignment tool allows the user to derive a structural alignment, taking into account both primary and secondary structures, from caRNAc output. 

In this work, we focus on the methods used in MARNA and give some hints about parameter settings that determine the alignments, and structure choices, especially when structures are missing for some sequences. For detailed comparison studies of MARNA with related multiple alignment tools, e.g., see refs. 4 and 5. 

Now, we are ready for the multiple alignment step. Suppose we have set of n RNAs together with their secondary structures. The main idea is to use the same strategy as proposed by the multiple alignment tool T-Coffee (3) ... 

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