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16S rDNA

Fig. 8. Phylogenetic analysis of 16S rDNA sequence of the isolate V 33 (Tanamool et al, 2011)... Fig. 8. Phylogenetic analysis of 16S rDNA sequence of the isolate V 33 (Tanamool et al, 2011)...
S. Jen.sen, L. Ovreas, F. L. Daae, and V. Torsvik, Diversity in methane enrichments from agricultural soil revealed by DGGE separation of PCR amplified 16S rDNA fragments. FEMS Microbiol. Ecol. 26 17 (1998). [Pg.259]

Based on 16S rDNA analysis (Olsen and Woese, 1993), a dozen main lineages have been described for the eubacteria, and at least four of these lineages have been shown to include intracellular bacteria the... [Pg.34]

Taylor, M.J., Bilo, K, Cross, H.F., Archer, J.P. and Underwood, A.P. (1999) 16S rDNA phylogeny and ultrastructural characterization of Wolbachia intracellular... [Pg.50]

Li ZJ, Xu JM, Tang C, Wu JJ, Akmal M, Wang HZ (2006) Application of 16S rDNA-PCR amplification and DGGE fingerprinting for detection of shift in microbial community diversity in Cu-, Zn-, and Cd- contaminated paddy soils. Chemosphere 62 1374-1380... [Pg.314]

Yang CH, Crowley DE, Menge JA (2001) 16S rDNA fingerprinting of rhizosphere bacterial communities associated with healthy and phytophthora infected avocado roots. FEMS Microbiol Ecol 35 129-136 Yemefack M, Jetten VG, Rossiter DG (2006) Developing a minimum data set for characterizing soil dynamics in shifting cultivation systems. Soil Tillage Res 86 84-98... [Pg.344]

FISH, terminal restriction-fragment length polymorphism analysis (rRNA-based molecular techniques) and comparative 16S rDNA analysis... [Pg.17]

Figure 17.1. Phylogenetic tree based on 16S rDNA sequence analysis showing the placement of the novel chemolithoautotrophic Fe(III) reducers. Capital and bold face letters, respiratory Fe(III) reducers , tested heterotrophic species that probably reduce Fe(III) predominantly in an assimilatory fashion. Figure 17.1. Phylogenetic tree based on 16S rDNA sequence analysis showing the placement of the novel chemolithoautotrophic Fe(III) reducers. Capital and bold face letters, respiratory Fe(III) reducers , tested heterotrophic species that probably reduce Fe(III) predominantly in an assimilatory fashion.
Acknowledgments. The authors are indebted to Anna Louise Reysenbach for the 16S rDNA sequence analysis. The authors also acknowledge Alex Slobodkin who introduced Fe(III) reduction to the laboratory. The initial work was supported by Genencor International. [Pg.248]

Wink, M. and von Nickisch-Rosenegk, E. (1997). Sequence data of mitochondrial 16S rDNA of arctiidae and nymphalidae evidence for a convergent evolution of pyrrolizidine alkaloid and cardiac glycoside sequestration. Journal of Chemical Ecology 23 1549-1568. [Pg.282]

Cottrell, M. T., and D. L. Kirchman. 2000a. Community composition of marine bacterio-plankton determined by 16S rDNA clone libraries and fluorescence in situ hybridization. Applied and Environmental Microbiology 66 5116-5122. [Pg.238]

Covert and Moran (2002) Marine Whole, HMW, and LMW DOM Bacterial respiration 16S rDNA clone libraries and T-RFLP No 6 weeks LMW DOM 4-1 Ox more bioavailable HMW DOM community dominated by a- and p-Proteobacteria LMW DOM community dominated by y- and 8-Proteobacteria... [Pg.352]

Assimilable organic carbon (AOC) was determined in water using flow-cytometric enumeration and a natural microbial consortium as inoculum.134 Two bacterial species were used for the measurement of AOC in water, based on their respective 16S rDNA sequences. The AOC content in 41 water samples was determined with these two sets by quantitative real-time polymerase chain reaction (qRT-PCR).135... [Pg.232]

Dahllof, I., Baillie, H., and Kjelleberg, S., rpoB-based microbial community analysis avoids limitations inherent to 16S rDNA intraspecies heterogeneity, Appl. Environ. Microb., 66, 3376, 2000. [Pg.382]

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See also in sourсe #XX -- [ Pg.309 ]



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16S rDNA fragments

16S rDNA sequencing

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